These organisms are highly haloalkaliphilic sulfur-oxidizing chemolithoautotrophs. Figure 5 Graphical representation of the different copper homeostasis repertoires identified in gamma proteobacteria by the two-dimensional optimization of the phylogenetic profile. Each circle represents a seed protein and circle size its relative abundance within a repertoire. The size of the circle of the most abundant protein

represents 100%. Color key: Inner membrane proteins in green, external membrane proteins in blue, periplasmic soluble proteins in red, and CusB in grey. The third repertoire (clade 2) is depicted in Figure 5b and comprises 63 organisms from 15 families of 10 different orders. In this clade the core is formed by CopA and a partial Cus system (CusABC). Exceptions lacking CusA and/or CusB are Marinomonas www.selleckchem.com/products/PD-98059.html sp. MWYL1 and 4 species of Vibrio and lacking CusC are Psychromonas ingrahamii 37, Aliivibrio salmonicida LFI1238, Allochromatium vinosum DSM 180 and Gamma proteobacterium. In the remaining organisms the core is accompanied by periplasmic GS-9973 chemical structure carriers: CusF in Pectobacterium, Edwardsiella, Acidithiobaciullus, Tolumona and Allochromatium; CueP in Ferrimonas and Pectobacterium;

PcoA and/or PcoC in Psychromonas, Methylococcus, Nitrosococcus, Alkalilimnicola, Legionella, Shewanella, Vibrio and Acidithiobacillus; and CueO in Aeromonas. CutF, an external membrane protein, was identified only in 4 species of Vibrio, Ferrimonas and Pectobacterium. The fourth repertoire (clade 3) is depicted in Figure 5c and comprises 10 organisms from 6 genera, each one of a different family. This group contains only CopA as core protein and only 2 species an MCO (CueO in Ruthia maifica and Coxiella burnetii Dugway 5J108-111). The lifestyle of these organisms is diverse: two genera comprised halophilic free-living isolates (Halorhodospora and Chromohalobacter), two other genera comprised human pathogens (Coxiella and Moraxella) and the last two genera comprised clam symbionts (Ruthia and Vesycomiosocius). This wide

versatility suggests thriving in C59 purchase soft environments that allow survival with the minimal function of copper active export from the cytoplasm to periplasm. The fifth repertoire (clade 4) is depicted in Figure 5d and comprises 90 organisms from a single family (Enterobacteriaceae). This group contains the 14 seed proteins being the core formed by CopA and the PcoC-CutF-YebZ-CueO-CusF cluster, complete in 8 genera and incomplete in other 8. The check details second most frequent cluster was CusABC, complete in 8 genera, partial in 6 more and totally absent in the last 4. The Pco system was identified in only 8 species belonging to 3 genera: Klebsiella, Escherichia and Enterobacter. Finally, CueP was identified only in Citrobacter, Yersinia and Salmonella. Some of these isolates have been characterized as animal pathogens, however many of them belong to the normal gut flora.