To circumvent this problem,

PCR-based site-directed mutagenesis may have been one of method to replace TGA codons in P1 gene as mentioned by Hames et al.[26], find more but we decided to synthesize the entire P1 gene into four different fragments by codon optimization. This included the N-terminal (P1-I) fragment, two middle fragments P1-II and P1-III and a C-terminal (P1-IV) fragment, which have been suggested to be immunodominant and to act as adhesins [14, 21, 25, 27]. All these fragments were cloned and expressed in an E. coli system [28–30]. The immunological and cytadherence characterization of all the four P1 protein fragments identified specific cytadherence regions. These results will enable to define strategies for the development of drug/vaccine against M. pneumoniae Dabrafenib solubility dmso infection. Results Cloning, expression and purification of P1 gene fragments

Four fragments of the M. pneumoniae P1 gene, i.e., P1-I, P1-II, P1-III, & P1-IV (Figure 1), were amplified by PCR, cloned in expression vector pET28b and expressed in E. coli BL21(DE3) cells. The expressed proteins were analyzed on SDS-PAGE. As shown in Figure 2A, four proteins of molecular weights: ~39 kDa, ~38 kDa, ~73 kDa, and ~43 kDa were induced and they were mainly expressed in inclusion bodies. The expressions of recombinant proteins were further confirmed by western blot analysis Sucrase using anti-6XHis antibody (Figure 2B i & ii). The expressed proteins were purified up to near homogeneity on a Ni2+-NTA column (Figure 2C). Fractions that contained single

band for each of the recombinant protein were pooled, dialyzed and further characterized. The expressed and purified proteins reacted nicely with anti-6XHis antibody (Figure 2D). SP600125 purchase Figure 1 Schematic representation of M. pneumoniae M129 P1 gene and its four gene fragments; P1-I, P1-II, P1-III and P1-IV. Each bar represents the position of UGA codons that codes for tryptophan. To express these fragments, UGA codons were modified to UGG. Fragments were amplified using a set of forward (F) and reverse primers (R). Figure 2 SDS-PAGE and Western blot analysis of recombinant M. pneumoniae P1 proteins fragments. (A) Coomassie blue stained SDS-PAGE analysis of rP1-I, rP1-II, rP1-III and rP1-IV in E. coli extract. The fragments were expressed in pET28b vector and protein production was induced with IPTG in E. coli. (B) Western blot analysis of induced and uninduced P1 protein fragments rP1-I, rP1-II, rP1-IV (i) and rP1-III (ii), showing reactivity with anti-6X His antibody. (C) Coomassie blue stained SDS-PAGE analysis of Ni2+-NTA purified P1 protein fragments; rP1-I, rP1-II, rP1-III and rP1-IV. (D) Western blot analysis of purified P1 protein fragments rP1-I, rP1-II, rP1-III and rP1-IV showing reactivity with anti-6X His antibody.