9 × 55.9 cm. Movement parameters were calculated using software based on infrared beam breaks. TTC staining TTC vital dye was utilized to assess CAL-101 order stroke size at 24 h. Brains were sectioned into 1-mm-thick slices and each slice was immersed in 1.5% TTC in phosphate buffered saline (PBS) at 37°C for 15 min and then fixed in 10% formalin. Histology Mice were terminally anesthetized with chloral hydrate and perfused with heparinized saline. Brains were fixed 24 h in 4% paraformaldehyde and then sunk through 30% sucrose in phosphate buffered saline. Forty micrometer coronal sections were cut sequentially into 24 tubes using a freezing

sliding microtome (Leica Microsystems, Inhibitors,research,lifescience,medical Wetzlar, Germany) such that each tube represented an equally spaced sample of sections 960 μm apart. One tube was stained using cresyl violet and the remaining tissue in the hemispheres ipsilateral and contralateral to stroke were traced. Statistics Repeated measures analysis of variance (ANOVA), Mann–Whitney and t-tests (Prism 5.0 statistical software for Mac OS Inhibitors,research,lifescience,medical X) were used to analyze behavioral test results as indicated in the figure legends. Mice that were not able to complete the ladder test on day 1 (n = 1), or could not swing in the EBST on day 4 (n = 2) were given the maximum score that any mouse was given Inhibitors,research,lifescience,medical on

that day. Results Hypoxic–ischemic stroke in adult C57BL/6J mice results in a variable stroke size We observed a wide variety of stroke sizes at 24 h, with three typical types of stroke. Some mice exhibited ischemia in the vast majority of the hemisphere (Fig. 2a, left), some had an intermediate-sized stroke with dense ischemia in the cortex and hippocampus and more diffuse injury in the striatum (Fig. 2a, middle), Inhibitors,research,lifescience,medical Inhibitors,research,lifescience,medical and others had either no visible ischemia or a small cortical

stroke (Fig. 2a, right). Of 13 mice that underwent hypoxic–ischemic stroke, the five with the smallest strokes averaged a stroke size of 11.4 ± 2.4% of the contralateral hemisphere. Five mice had large strokes that measured 38.2 ± 2.7% of the hemisphere, and the remaining three mice had very large strokes measuring 56.4 ± 4.4% of the hemisphere. These three categories were all statistically different in size (small vs. large, P < 0.0001; large vs. very large, P < 0.001; ANOVA with Tukey's post hoc.) Figure 2 Hypoxic–ischemic stroke results Resminostat in variable stroke size. (a) Typical TTC stains from 24 h after hypoxic–ischemic stroke. Left, large and likely fatal stroke; middle, survivable large stroke; right, small stroke. (b) Stroke size in surviving … In a larger cohort that we followed for 6 weeks, all-cause mortality was approximately one-third, and the majority of this was during hypoxia or during the first 3 days after stroke. In the surviving 28 mice, there was no difference in the mean or distribution of stroke sizes between surgeons (Fig. 2b).